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  • 2011

    Three-dimensional super-resolution imaging with a corkscrew point spread function

    Lew, M. D., Lee, S. F. & Moerner, W. E., 2011, Novel Techniques in Microscopy, NTM 2011. Optical Society of America (OSA), (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • TRPM7, the Mg 2+ inhibited channel and kinase

    Bates-Withers, C., Sah, R. & Clapham, D. E., Dec 15 2011, Transient Receptor Potential Channels. Islam, S. & Islam, S. (eds.). p. 173-183 11 p. (Advances in Experimental Medicine and Biology; vol. 704).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    71 Scopus citations
  • Ultra-high-quality Whispering-Gallery-Mode resonators for single nanoparticle detection and measurement

    Yang, L., Zhu, J., He, L., Ozdemir, S. K. & Kim, W., 2011, Frontiers in Optics, FiO 2011. Optical Society of America (OSA), (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • 2010

    An application of smoothing splines for molecular imaging of tumors using an improved calculation of a limiting form of Renyi entropy

    Hughes, M. S., Marsh, J. N., Wallace, K. D., Lanza, G. M., Wickline, S. A., McCarthy, J. E., Wickerhauser, M. V. & Maurizi, B. N., Dec 1 2010, 2010 IEEE International Ultrasonics Symposium, IUS 2010. p. 45-48 4 p. 5935961. (Proceedings - IEEE Ultrasonics Symposium).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • An enhanced biosensing model in coupled optical microresonators

    Xiao, Y. F. & Yang, L., 2010, Photonic Microdevices/Microstructures for Sensing II. 76820D. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 7682).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Application of a limiting form of the Ŕnyi entropy for molecular imaging of tumors using a clinically relevant protocol

    Marsh, J. N., Wallace, K. D., Lanza, G. M., Wickline, S. A., Hughes, M. S., McCarthy, J. E. & Wickerhauser, M. V., 2010, 2010 IEEE International Ultrasonics Symposium, IUS 2010. p. 53-56 4 p. 5935829. (Proceedings - IEEE Ultrasonics Symposium).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    7 Scopus citations
  • Application of the virtual fields method to magnetic resonance elastography data

    Pierron, F., Bayly, P. V. & Namani, R., 2010, Society for Experimental Mechanics - SEM Annual Conference and Exposition on Experimental and Applied Mechanics 2010. p. 681-688 8 p. (Society for Experimental Mechanics - SEM Annual Conference and Exposition on Experimental and Applied Mechanics 2010; vol. 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    5 Scopus citations
  • Bi-Material attachment through a soft tissue interfacial system

    Liu, Y. X., Thomopoulos, S., Birman, V., Li, J. S. & Genin, G. M., 2010, ASME 2010 Summer Bioengineering Conference, SBC 2010. PARTS A AND B ed. p. 865-866 2 p. (ASME 2010 Summer Bioengineering Conference, SBC 2010; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Biological applications of fluorescence lifetime imaging beyond microscopy

    Akers, W. J., Berezin, M. Y., Lee, H., Guo, K., Almutairi, A., Fréchet, J. M. J., Fischer, G. M., Daltrozzo, E. & Achilefu, S., 2010, Reporters, Markers, Dyes, Nanoparticles, and Molecular Probes for Biomedical Applications II. 757612. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7576).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    9 Scopus citations
  • Comparison of dynamic mechanical testing and MR elastography of biomaterials

    Clayton, E. H., Okamoto, R. J., Wilson, K. S., Namani, R. & Bayly, P. V., 2010, Society for Experimental Mechanics - SEM Annual Conference and Exposition on Experimental and Applied Mechanics 2010. p. 874-881 8 p. (Society for Experimental Mechanics - SEM Annual Conference and Exposition on Experimental and Applied Mechanics 2010; vol. 2).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Constrained Kalman filtering for IMRT optimization

    Dasanayake, I., El Naqa, I. & Li, J. S., 2010, 2010 49th IEEE Conference on Decision and Control, CDC 2010. Institute of Electrical and Electronics Engineers Inc., p. 4703-4708 6 p. 5717478. (Proceedings of the IEEE Conference on Decision and Control).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Control of a network of spiking neurons

    Li, J. S., 2010, 8th IFAC Symposium on Nonlinear Control Systems, NOLCOS 2010. 14 ed. IFAC Secretariat, p. 314-319 6 p. (IFAC Proceedings Volumes (IFAC-PapersOnline); vol. 43, no. 14).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    Open Access
    12 Scopus citations
  • Detecting changes in the cervix with Raman spectroscopy

    Vargis, E., Byrd, T., Reese, J., Khabele, D., Al-Hendy, A. & Mahadevan-Jansen, A., 2010, XXII International Conference on Raman Spectroscopy, ICORS 2010. p. 441-442 2 p. (AIP Conference Proceedings; vol. 1267).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    1 Scopus citations
  • Detecting coevolution of functionally related proteins for automated protein annotation

    Kwan, A. L., Dutcher, S. K. & Stormo, G. D., 2010, 10th IEEE International Conference on Bioinformatics and Bioengineering 2010, BIBE 2010. p. 99-105 7 p. 5521705. (10th IEEE International Conference on Bioinformatics and Bioengineering 2010, BIBE 2010).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    Open Access
    2 Scopus citations
  • Detection and sizing of single nanoparticles by mode splitting in an optical microresonator

    Zhu, J., Ozdemir, S. K., Xiao, Y. F., Li, L., He, L., Chen, D. R. & Yang, L., 2010, Conference on Lasers and Electro-Optics, CLEO 2010. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Detection and sizing of single nanoparticles by mode splitting in an optical microresonator

    Zhu, J., Kaya Ozdemir, S., Xiao, Y. F., Li, L., He, L., Chen, D. R. & Yang, L., 2010, Lasers and Electro-Optics/Quantum Electronics and Laser Science Conference: 2010 Laser Science to Photonic Applications, CLEO/QELS 2010. 5500425. (Lasers and Electro-Optics/Quantum Electronics and Laser Science Conference: 2010 Laser Science to Photonic Applications, CLEO/QELS 2010).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Developing brain and heart cells respond similarly to altered mechanical loads

    Filas, B. A., Bayly, P. V. & Taber, L. A., 2010, ASME 2010 Summer Bioengineering Conference, SBC 2010. PARTS A AND B ed. p. 773-774 2 p. (ASME 2010 Summer Bioengineering Conference, SBC 2010; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Enhancement of a label-free dielectrophoretic cell sorter with an integrated impedance detection system

    Carminati, M., Vahey, M. D., Rottigni, A., Ferrari, G., Voldman, J. & Sampietro, M., 2010, 14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010. p. 1394-1396 3 p. (14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010; vol. 2).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    8 Scopus citations
  • Experimental and computational study of the mechanics of brain folding

    Xu, G., Bayly, P. V. & Taber, L. A., 2010, ASME 2010 Summer Bioengineering Conference, SBC 2010. PARTS A AND B ed. p. 49-50 2 p. (ASME 2010 Summer Bioengineering Conference, SBC 2010; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Functional grading of plga nanofiber scaffolds for tendon-to-bone insertion tissue engineering

    Lipner, J., Li, X., Liu, Y. X., Mangano, M., Xie, J., Genin, G. M., Xia, Y. & Thomopoulos, S., 2010, ASME 2010 Summer Bioengineering Conference, SBC 2010. PARTS A AND B ed. p. 383-384 2 p. (ASME 2010 Summer Bioengineering Conference, SBC 2010; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Gaussianization of random inputs by filtering plants: The case of poisson white and telegraph processes

    Ching, S. N., Meerkov, S. M. & Runolfsson, T., 2010, 2010 49th IEEE Conference on Decision and Control, CDC 2010. Institute of Electrical and Electronics Engineers Inc., p. 2650-2655 6 p. 5717835. (Proceedings of the IEEE Conference on Decision and Control).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    5 Scopus citations
  • Genome-wide analysis of electrical phenotype using isodielectric separation

    Vahey, M. D., Svensson, J. P., Quiros Pesudo, L., Samson, L. D. & Voldman, J., 2010, 14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010. p. 725-727 3 p. (14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010; vol. 2).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • In vivo three-dimensional superresolution fluorescence tracking using a double-helix point spread function

    Lew, M. D., Thompson, M. A., Badieirostami, M. & Moerner, W. E., 2010, Single Molecule Spectroscopy and Imaging III. 75710Z. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7571).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    19 Scopus citations
  • Leveraging natural language processing of clinical narratives for phenotype modeling

    Raghavan, P. & Lai, A. M., 2010, Proceedings of the 3rd Workshop on Ph.D. Students in Information and Knowledge Management, PIKM'10, Co-located with 19th International Conference on Information and Knowledge Management, CIKM'10. p. 57-65 9 p. (International Conference on Information and Knowledge Management, Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    3 Scopus citations
  • Localizing and tracking single emitters in three dimensions using a double-helix point spread function

    Thompson, M. A., Lew, M. D., Badieirostami, M. & Moerner, W. E., 2010, Conference on Lasers and Electro-Optics, CLEO 2010. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Localizing and tracking single emitters in three dimensions using a Double-Helix Point Spread Function

    Thompson, M. A., Lew, M. D., Badieirostami, M. & Moerner, W. E., 2010, Lasers and Electro-Optics/Quantum Electronics and Laser Science Conference: 2010 Laser Science to Photonic Applications, CLEO/QELS 2010. Association for Computing Machinery, 5499680. (Lasers and Electro-Optics/Quantum Electronics and Laser Science Conference: 2010 Laser Science to Photonic Applications, CLEO/QELS 2010).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Magnetic resonance elastography of the mouse vitreous humor In Vivo

    Clayton, E. H., Wang, Q., Song, S. K., Okamoto, R. J. & Bayly, P. V., 2010, Society for Experimental Mechanics - SEM Annual Conference and Exposition on Experimental and Applied Mechanics 2010. p. 676-680 5 p. (Society for Experimental Mechanics - SEM Annual Conference and Exposition on Experimental and Applied Mechanics 2010; vol. 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Measurement of brain biomechanics in vivo by magnetic resonance imaging

    Bayly, P. V., Clayton, E. H., Feng, Y., Abney, T., Namani, R., Okamoto, R. J. & Genin, G. M., 2010, Society for Experimental Mechanics - SEM Annual Conference and Exposition on Experimental and Applied Mechanics 2010. p. 664-675 12 p. (Society for Experimental Mechanics - SEM Annual Conference and Exposition on Experimental and Applied Mechanics 2010; vol. 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Mechanzically-induced cytoskeletal remodeling in 3D cultures of contractile fibroblasts

    Lee, S. L., Pryse, K. M., Butler, B., Elson, E. L. & Genin, G. M., Dec 1 2010, ASME 2010 Summer Bioengineering Conference, SBC 2010. PARTS A AND B ed. p. 201-202 2 p. (ASME 2010 Summer Bioengineering Conference, SBC 2010; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Modeling and control of cyclic systems in xerography

    Ching, S. N., Eun, Y., Gross, E., Hamby, E., Kabamba, P., Meerkov, S. & Menezes, A., 2010, Proceedings of the 2010 American Control Conference, ACC 2010. p. 4283-4288 6 p. 5530813. (Proceedings of the 2010 American Control Conference, ACC 2010).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    5 Scopus citations
  • Multimodal nonlinear microscopy at 1.5 μm

    Zhan, C., Joo, C., Li, Q., Berezin, M. Y., Akers, W. J., Ye, Y., Achilefu, S. & Yazdanfar, S., 2010, Multiphoton Microscopy in the Biomedical Sciences X. 75691Z. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7569).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • On-chip single nanoparticle detection using ultra-high-Q whispering gallery microresonator

    Yang, L., Zhu, J., Ozdemir, S. K., He, L., Xiao, Y., Li, L. & Chen, D. R., 2010, Photonic Microdevices/Microstructures for Sensing II. 76820B. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 7682).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Optical detection of nanoparticles by mode splitting in whispering-gallery-mode microcavities

    Zhu, J., Ozdemir, S. K., He, L., Chen, D. R. & Yang, L., 2010, Photonic Microdevices/Microstructures for Sensing II. 76820A. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 7682).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Optimal ensemble control of open quantum systems with a pseudospectral method

    Ruths, J. & Li, S., 2010, 2010 49th IEEE Conference on Decision and Control, CDC 2010. Institute of Electrical and Electronics Engineers Inc., p. 3008-3013 6 p. 5717100. (Proceedings of the IEEE Conference on Decision and Control).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    8 Scopus citations
  • Piecewise tri-linear contouring for multi-material volumes

    Feng, P., Ju, T. & Warren, J., 2010, Advances in Geometric Modeling and Processing - 6th International Conference, GMP 2010, Proceedings. p. 43-56 14 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6130 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    9 Scopus citations
  • Polygonizing extremal surfaces with manifold guarantees

    Li, R., Liu, L., Phan, L., Abeysinghe, S., Grimm, C. & Ju, T., 2010, Proceedings - 14th ACM Symposium on Solid and Physical Modeling, SPM'10. p. 189-194 6 p. (Proceedings - 14th ACM Symposium on Solid and Physical Modeling, SPM'10).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    11 Scopus citations
  • Popup: Automatic paper architectures from 3D models

    Li, X. Y., Shen, C. H., Huang, S. S., Ju, T. & Hu, S. M., Jul 26 2010, ACM SIGGRAPH 2010 Papers, SIGGRAPH 2010. Hoppe, H. (ed.). Association for Computing Machinery, Inc, 111. (ACM SIGGRAPH 2010 Papers, SIGGRAPH 2010).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    20 Scopus citations
  • Principal components of brain deformation in response to skull acceleration: The roles of sliding and tethering between the brain and skull

    Abney, T. M., Feng, Y. A., Pless, R., Okamoto, R. J., Genin, G. M. & Bayly, P. V., 2010, 26th Southern Biomedical Engineering Conference SBEC 2010. p. 9-12 4 p. (IFMBE Proceedings; vol. 32 IFMBE).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    1 Scopus citations
  • Probing cytoskeletal mechanics using biochemical inhibitors

    Pryse, K. M., Abney, T. M., Genin, G. M. & Elson, E. L., Dec 1 2010, ASME 2010 Summer Bioengineering Conference, SBC 2010. PARTS A AND B ed. p. 357-358 2 p. (ASME 2010 Summer Bioengineering Conference, SBC 2010; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Scatterer induced mode splitting in active microcavities

    He, L., Ozdemir, S. K., Zhu, J. & Yang, L., 2010, Conference on Lasers and Electro-Optics, CLEO 2010. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Scatterer induced mode splitting in active microcavities

    He, L., Ozdemir, S. K., Zhu, J. & Yang, L., 2010, Lasers and Electro-Optics/Quantum Electronics and Laser Science Conference: 2010 Laser Science to Photonic Applications, CLEO/QELS 2010. 5500453. (Lasers and Electro-Optics/Quantum Electronics and Laser Science Conference: 2010 Laser Science to Photonic Applications, CLEO/QELS 2010).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Self-pulsing in on-chip Er-doped microcavity lasers

    He, L., Ozdemir, S. K., Zhu, J. & Yang, L., 2010, Lasers and Electro-Optics/Quantum Electronics and Laser Science Conference: 2010 Laser Science to Photonic Applications, CLEO/QELS 2010. 5499603. (Lasers and Electro-Optics/Quantum Electronics and Laser Science Conference: 2010 Laser Science to Photonic Applications, CLEO/QELS 2010).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Self-pulsing in on-chip Er-doped microcavity lasers

    He, L., Ozdemir, S. K., Zhu, J. & Yang, L., 2010, Conference on Lasers and Electro-Optics, CLEO 2010. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Strategies for developing pH sensitive fluorescent probes

    Berezin, M. Y., Guo, K., Lee, H., Akers, W., Almutairi, A., Fréchet, J. M. J. & Achilefu, S., 2010, Reporters, Markers, Dyes, Nanoparticles, and Molecular Probes for Biomedical Applications II. 75760F. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7576).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    2 Scopus citations
  • The dominant mechanical interaction between the brain and skull in vivo is sliding arrested at key points of brain-skull tethering

    Abney, T. M., Feng, Y. A., Pless, R., Okamoto, R. J., Genin, G. M. & Bayly, P. V., 2010, ASME 2010 Summer Bioengineering Conference, SBC 2010. PARTS A AND B ed. p. 907-908 2 p. (ASME 2010 Summer Bioengineering Conference, SBC 2010; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • The nanostructure and nanomechanics of a novel black widow spider silk assessed using atomic force microscopy

    Tang, S. Y., Hsia, Y. & Vierra, C., Dec 1 2010, ASME 2010 Summer Bioengineering Conference, SBC 2010. PARTS A AND B ed. p. 951-952 2 p. (ASME 2010 Summer Bioengineering Conference, SBC 2010; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Validation of magnetic resonance elastography by dynamic shear testing in the shear wave regime

    Okamoto, R. J., Clayton, E. H., Wilson, K. S. & Bayly, P. V., 2010, ASME 2010 Summer Bioengineering Conference, SBC 2010. PARTS A AND B ed. p. 391-392 2 p. (ASME 2010 Summer Bioengineering Conference, SBC 2010; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • VDBench: A benchmarking toolkit for thin-client based virtual desktop environments

    Berryman, A., Calyam, P., Honigford, M. & Lai, A. M., 2010, Proceedings - 2nd IEEE International Conference on Cloud Computing Technology and Science, CloudCom 2010. p. 480-487 8 p. 5708490. (Proceedings - 2nd IEEE International Conference on Cloud Computing Technology and Science, CloudCom 2010).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    41 Scopus citations
  • Wave propagation in the human brain and skull imaged in vivo by MR elastography

    Clayton, E. H., Genin, G. M. & Bayly, P. V., 2010, 26th Southern Biomedical Engineering Conference SBEC 2010. p. 31-33 3 p. (IFMBE Proceedings; vol. 32 IFMBE).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    3 Scopus citations
  • 2009

    Active and passive responses of myofibroblasts in response to mechanical stretching in 3D culture

    Nathan, A. C., Lee, S. L., Marquez, J. P., Ju, T., Pryse, K. M., Elson, E. L. & Genin, G. M., Dec 1 2009, Proceedings of the ASME Summer Bioengineering Conference, SBC2008. PART B ed. p. 649-650 2 p. (Proceedings of the ASME Summer Bioengineering Conference, SBC2008; no. PART B).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    1 Scopus citations