Computational Imaging Research Center

Search results

  • 2012

    PyXNAT: XNAT in Python

    Schwartz, Y., Barbot, A., Thyreau, B., Frouin, V., Varoquaux, G., Siram, A., Marcus, D. S. & Poline, J. B., May 24 2012, In: Frontiers in Neuroinformatics. 6, MARCH, 12.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    32 Scopus citations

  • SU‐E‐I‐23: Effective Estimation of Focal Spot Isocenter for Sinograms Obtained with Flying Focal Spot Scans for Filtered Back Projection

    yu, Y., Whiting, B., Politte, D. & Williamson, J., Jun 2012, In: Medical physics. 39, 6, p. 3630 1 p.

    Research output: Contribution to journal › Article › peer-review

  • TH‐A‐217BCD‐04: Accuracy of Dual‐Energy CT Photon Cross‐Section Mapping Using a Non‐Separable Two Parameter Cross‐Section Model

    Han, D., Sampson, A., Politte, D., O'sullivan, J., Siebers, J. & Williamson, J., Jun 2012, In: Medical physics. 39, 6, p. 3989 1 p.

    Research output: Contribution to journal › Article › peer-review

    2 Scopus citations

  • The Human Connectome Project: A data acquisition perspective

    Van Essen, D. C., Ugurbil, K., Auerbach, E., Barch, D., Behrens, T. E. J., Bucholz, R., Chang, A., Chen, L., Corbetta, M., Curtiss, S. W., Della Penna, S., Feinberg, D., Glasser, M. F., Harel, N., Heath, A. C., Larson-Prior, L., Marcus, D., Michalareas, G., Moeller, S. & Oostenveld, R. & 7 others, Petersen, S. E., Prior, F., Schlaggar, B. L., Smith, S. M., Snyder, A. Z., Xu, J. & Yacoub, E., Oct 1 2012, In: NeuroImage. 62, 4, p. 2222-2231 10 p.

    Research output: Contribution to journal › Review article › peer-review

    Open Access
    1733 Scopus citations

  • Ultrasound-image-based displacement and strain maps of the human carotid artery using weighted-least-squares optical flow

    Apostolakis, I. Z., Gastounioti, A., Golemati, S. & Nikita, K. S., 2012, IST 2012 - 2012 IEEE International Conference on Imaging Systems and Techniques, Proceedings. p. 106-111 6 p. 6295565. (IST 2012 - 2012 IEEE International Conference on Imaging Systems and Techniques, Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • Where does transcranial magnetic stimulation (TMS) stimulate? Modelling of induced field maps for some common cortical and cerebellar targets

    Bijsterbosch, J. D., Barker, A. T., Lee, K. H. & Woodruff, P. W. R., Jul 2012, In: Medical and Biological Engineering and Computing. 50, 7, p. 671-681 11 p.

    Research output: Contribution to journal › Article › peer-review

    95 Scopus citations

  • Whitepapers on imaging infrastructure for research: Part 1: General workflow considerations

    Erickson, B. J., Pan, T. & Marcus, D. S., Aug 2012, In: Journal of Digital Imaging. 25, 4, p. 449-453 5 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    5 Scopus citations

  • Whitepapers on imaging infrastructure for research part three: Security and privacy

    Pan, T., Erickson, B. J. & Marcus, D. S., Dec 2012, In: Journal of Digital Imaging. 25, 6, p. 692-702 11 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    5 Scopus citations

  • XCEDE: An extensible schema for biomedical data

    Gadde, S., Aucoin, N., Grethe, J. S., Keator, D. B., Marcus, D. S. & Pieper, S., Jan 2012, In: Neuroinformatics. 10, 1, p. 19-32 14 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    38 Scopus citations
  • 2011

    Affine optical flow combined with multiscale image analysis for motion estimation of the arterial wall from B-mode ultrasound

    Gastounioti, A., Tsiaparas, N. N., Golemati, S., Stoitsis, J. S. & Nikita, K. S., 2011, 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2011. p. 559-562 4 p. 6090103. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    9 Scopus citations

  • Cerebrospinal fluid biomarkers, education, brain volume, and future cognition

    Roe, C. M., Fagan, A. M., Grant, E. A., Marcus, D. S., Benzinger, T. L. S., Mintun, M. A., Holtzman, D. M. & Morris, J. C., Sep 2011, In: Archives of neurology. 68, 9, p. 1145-1152 8 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    43 Scopus citations

  • Comparison of Kalman-filter-based approaches for block matching in arterial wall motion analysis from B-mode ultrasound

    Gastounioti, A., Golemati, S., Stoitsis, J. & Nikita, K. S., Nov 2011, In: Measurement Science and Technology. 22, 11, 114008.

    Research output: Contribution to journal › Article › peer-review

    42 Scopus citations

  • Continuous theta burst stimulation over the left pre-motor cortex affects sensorimotor timing accuracy and supraliminal error correction

    Bijsterbosch, J. D., Lee, K. H., Dyson-Sutton, W., Barker, A. T. & Woodruff, P. W. R., Sep 2 2011, In: Brain Research. 1410, p. 101-111 11 p.

    Research output: Contribution to journal › Article › peer-review

    22 Scopus citations

  • Deformable medical image registration: Setting the state of the art with discrete methods

    Glocker, B., Sotiras, A., Komodakis, N. & Paragios, N., Aug 15 2011, In: Annual Review of Biomedical Engineering. 13, p. 219-244 26 p.

    Research output: Contribution to journal › Article › peer-review

    166 Scopus citations

  • DRAMMS: Deformable registration via attribute matching and mutual-saliency weighting

    Ou, Y., Sotiras, A., Paragios, N. & Davatzikos, C., Aug 2011, In: Medical Image Analysis. 15, 4, p. 622-639 18 p.

    Research output: Contribution to journal › Article › peer-review

    330 Scopus citations

  • Effect of contrast magnitude and resolution metric on noise-resolution tradeoffs in x-ray CT imaging: A comparison of non-quadratic penalized alternating minimization and filtered backprojection algorithms

    Evans, J. D., Politte, D. G., Whiting, B. R., O'Sullivan, J. A. & Williamson, J. F., 2011, Medical Imaging 2011: Physics of Medical Imaging. 79612C. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7961).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    6 Scopus citations

  • Efficient parallel message computation for MAP inference

    Alchatzidis, S., Sotiras, A. & Paragios, N., 2011, 2011 International Conference on Computer Vision, ICCV 2011. p. 1379-1386 8 p. 6126392. (Proceedings of the IEEE International Conference on Computer Vision).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    5 Scopus citations

  • Improving CSF biomarker accuracy in predicting prevalent and incident Alzheimer disease

    Roe, C. M., Fagan, A. M., Williams, M. M., Ghoshal, N., Aeschleman, M., Grant, E. A., Marcus, D. S., Mintun, M. A., Holtzman, D. M. & Morris, J. C., Feb 8 2011, In: Neurology. 76, 6, p. 501-510 10 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    44 Scopus citations

  • Informatics and data mining tools and strategies for the human connectome project

    Marcus, D. S., Harwell, J., Olsen, T., Hodge, M., Glasser, M. F., Prior, F., Jenkinson, M., Laumann, T., Curtiss, S. W. & Van Essen, D. C., Jun 27 2011, In: Frontiers in Neuroinformatics. 5, 4.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    428 Scopus citations

  • Magnetic resonance imaging measurement reproducibility for calf muscle and adipose tissue volume

    Commean, P. K., Tuttle, L. J., Hastings, M. K., Strube, M. J. & Mueller, M. J., Dec 2011, In: Journal of Magnetic Resonance Imaging. 34, 6, p. 1285-1294 10 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    34 Scopus citations

  • Multiscale approach for weighted least-squares optical flow for estimating arterial wall displacements

    Gastounioti, A., Golemati, S., Tsiaparas, N. N., Stoitsis, J. S. & Nikita, K. S., 2011, 10th International Workshop on Biomedical Engineering, BioEng 2011. 6079061. (10th International Workshop on Biomedical Engineering, BioEng 2011).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    3 Scopus citations

  • Noise-resolution tradeoffs in x-ray CT imaging: A comparison of penalized alternating minimization and filtered backprojection algorithms

    Evans, J. D., Politte, D. G., Whiting, B. R., O'Sullivan, J. A. & Williamson, J. F., Mar 2011, In: Medical physics. 38, 3, p. 1444-1458 15 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    49 Scopus citations

  • The national lung screening trial: Overview and study design

    Gatsonis, C. A., Aberle, D. R., Berg, C. D., Black, W. C., Church, T. R., Fagerstrom, R. M., Galen, B., Gareen, I. F., Goldin, J., Gohagan, J. K., Hillman, B., Jaffe, C., Kramer, B. S., Lynch, D., Marcus, P. M., Schnall, M., Sullivan, D. C., Sullivan, D., Zylak, C. J. & Cagnon, C. & 1,293 others, Cody, D., Fletcher, G., Flynn, M. J., Judy, P. F., Kruger, R., Larke, F. J., McNitt-Gray, M., Payne, T., Anthony Seibert, J., Wu, X., Abbott, G., Amorosa, J. K., Barr, R. G., Boiselle, P. M., Chiles, C., Clark, R., Coppage, L., Falk, R., Fishman, E. K., Gemmel, D., Goldin, J. G., Goodman, E., Hart, E. M., Hazelton, T., Johnson, E., Kazerooni, E., McComb, B., McLennan, G., Munden, R. F., Ravenel, J., Sullivan, M., Swensen, S. J., Torigian, D. A., Vydareny, K. H., Worrell, J. A., Balkin, P., Fouad, M., Freedman, M. T., Garg, K., Gelmann, E. P., Gierada, D. S., Hocking, W., Inampudi, S., Isaacs, C., Kvale, P., Mann, H., Manor, W., Nath, H., Reding, D., Spizarny, D. L., Strollo, D. C., Waltz, J., Chen, M. H., Duan, F., Izmirilian, G., Pinsky, P., Prorok, P. C., Miller, A. B., Edelman, M. J., Evans, W. K., Fontana, R. S., Machtay, M., Clark, K. W., Clingan, K. L., Ford, M. B., Márquez, G., Moore, S. M., Ohan, P., Peace, S., Rosenbaum, J. L., Barr, R., Young, R. C., Alberts, D., DeMets, D., Greenwald, P., Jacobs, P., McLoud, T. C., Naidich, D. P., Tatum, J., Sausville, E. A., Burke, W., Colice, G., Edwards, B., Emerson, S., Fletcher, J., Green, S., Harris, R., Klein, J. S., Korn, E. L., Mayer, R., Selby, J. V., Sturges, D. W., Turnbull, B. W., Watson, T. J., Baylin, S., Caporaso, N., Dennis, P., Dubinett, S., Franklin, W., Grizzle, W., Hirsch, F., Massion, P., McKeeta-Frobeck, K., Minna, J., Patz, E., Spitz, M., Berg, C. B., Corle, D., Hu, P., Izmirlian, G., Gaegler, J., Hoffman, S., Jackson, C., Lange, E., Papadopoulos, E., Apgar, C., Boyle, A., Caldwell, T., Fredericks, N., Harbison, D., Hartfeil, D., Jones, S., King, S., Mahon, I., Medina, R., Masiejczyk, C., Zamora, P., Brastater, H., Iyer, V., George, J., Gopalakrishnan, D., Blair, P., Bradley, M., Crozier, C., Oh, M., Spiese, N., Steward, C., Kelly-Truran, M., Thompson, T., Cunningham, E., Levering, A., McMurtrie, K., Nahill, M., Snowden, S., Smith, K., Wilton, F., Welsh, T., Welsh, R., Christie, W., Clabo, S., Clune, R., Cunningham, N., Downs, J., Dymond, L., Falcone, J., Harris, S., Harvey, P., Hill, J., Hill, L., Letizia, D., Looney, K., McGinley, H., Mean, A., Moore, M., Norton, R., Ortico, V., Sabina, S., Sole, R., Stetz, J. A., Ssali, A., Stubblefield, J., Taylor, T., White, S., Lu, B., Adams, A., Baum, S., Blevins, M., Fox, P., Girardi, V., Gorelick, J., Hunt, E., McMullen, Q., Meganathan, K., Rendas-Baum, R., Sicks, J. R. D., Snyder, B., Yeh, M., Duggan, M., Souza, C., Cahill, J., Brewer, B. K., O'Brien, B., Devereux, G., Fritz, M. S., Galbraith, M., Harkins, J., Keating, K. J., Midkiff, K., Singh, U., Zimmerman, T., Payte, N., Price, H., Caughman, C., Chanapatna, R., Florzyk, M., Lee, A., Morgan, A., Yang, J., Ellen Martinusen, L., McSwain, J., Rosario, R., Singh, J., DeBaugh, R. A., Campleman, S., Mesnard, M., Ragard, L., Lewis, T., Roberts, L. M., Narayanaswami, V., Ralda, V., Lake, W., Riley, T., Clapp, J. B., Austin, J., Irons, B., Xu, F. F., Jones, G. C., Young, M., Goodman, A., Kibic, C., Sheridan, P., Kadish, N., Moline, D., Phillips, R., Adkinson, M., Creed, D., DeCoste, T., Gembala, D., Hurst, S., King, E., Knowles, J., McBride, P., Pangburn, P., Preston, J., Stokes, K., Tesch, P., Wenmoth, S., Galocy, L., Mandley, D., Orvis, G., Dial, A., Clark, L., Cohen, L., Gerber, J., Jamis-Dow, C., Makariou, E., Smith, E., Garrett, A., McGuire, C., Neff, S., Riley, T., Cantrell, S., Marsh, G., Wray, C., Yondonsambuu, B., Giles, U., Brown, V., Evangelista, A. L., Hammond, T., Nickel, J., Brangan, M., Lee, M., Lin, C., Adkins, E., Armah, G., Blue, C., Cooke, V., Gray, N., Gustitis, M., Hawkins, L., Isaacs, G., Kim, M., King, M., Kumbalasiri, K., Laura, R., McDaniel, K., Mulugeta, A., Riley, L., Sorrell, S., Thomas, W., Woodard, L., Johnson, C. C., Tammemagi, M., Sen, G. J., Sankey, S., Schultz, L., Albertsen, K., Broski, K., Kucera, G., Poler, K., Spoutz-Ryan, C., Thomas, D., Griesemer, E., Kwit, B., Fantuz, P., McLellan, B., Simmons, D., Hafeez, Y., Maddy, N., Davis, L. T., Estell, R., Kozakowski, S., Rowe, J., Stanley, M., Zhang, X., Frebes, M. E., Paquette, M., Tecmire, M., Young, L., Greene, D., Hill, C., Young, K., Bellware, K., Bohn, K., Caird, N., Fink, H., Fiarman, S., Houston, M., Jolly, A., Krzeczkowski, C., Mack, C., Murray, L., Nanovski, A., Rempinski, D., Tumberlinson, H., William, D., Eldridge-Smith, E., Graves, V., Szabo, N., Crump, J., Kruger, R., Greenlee, R., Lappe, K., Multerer, D., Kriescher, D., Vieth, A., Wein, S., Fuehrer, D., Gjertson, C., Krebsbach, J., Kuhlka, C., Luttrop, K., Netzer, J., Wegner, J., Fischer, V., Mathiesen-Viergutz, K., Kofka, K., Jablonsky, N., Johnson, B., Kitchner, T., Mueller, L., Rueth, A., Wachholz, S., Bohman, K., Bruger, M., Kramer, K. R., Kuenhold, K., Mueller, C., Mueller, C., Multerer, L., Zahradka, S., Alkilidar, J., Bhattacharjee, N., Cangelosi, C., Carlson, R., Coppens, A., Cousins, M., Edelstein, B., Gerndt, K., Heffernon, J., Hinke, T., Hinson, M., Hutchins, L., Lieberman, K., Mulligan, G., Omoba, E., Risa, T., Sheflin, J., Swan, T., Warner, J., Williams, A., Yokochi, L., Adaniya, R., Glanz, K., Navin, J., Shambaugh, V., Tabrah, F., Willcox, B., Williams, P., He, Q., Jenkins, V., Bow, K., Tsukamoto, J., Hyun, S., Brown, E., Morrow, H., Stryker, K., Shiratori, H., Lau, P., Au, B., Francis, W., Bolan, L., Brooke, J., Calulot, M., Chun, V., Rabanal, K., Tani, J., Lewis, C., Morfit, J., Brunst, A., Turner, L., Hino, G., Chung, A., Elbon-Copp, C., Huynh, W., Johnson, M., Nakano, E., Villaruz, L., Bailey, W. C., Garver, R., Brawner, D., Malcomb, I., Morgan, D., Sanders, P. C., Sandy, A., Schwartz, M., Singh, S., Dransfield, M., Higgins, D., Moore, A., Acemgil, A., Blake, T., Lee, J., Quattlebaum, S., Schach, J., Martin, T., Khatri, R., Gendi, W., Powell, B., Johnson, C., Sears, J., Jordan, S., Prayer, V., Walker, C., Johnson, M., Thompson, J., David Crawford, E., Bunn, P., Gamito, E., Ogden, S., Pretzel, S., Ramsay, L., Vaughn, C., Whiton, C., Sammons, D., Springhetti, L., Tenorio, S., Cadez, N., Laster, S., O'Donnell, C., Hughes, J., Livingston, J. G., Morrison, G., Moss, W., Mullennix, M., Peters, M., Sahin, H., Slear, M., Burek, M., Hill, C., Jewitt, E., Pena, R., Ordonez, E., Sammons, G., Hernandez, J., Reyes, A., Somoza, A., Oken, M., Bay, B., Edelman, K., Fox, T., Gaerte, S., Myra-Bloom, K., Plunkett, M., Olson, F., Rust, P., Schneider, L., Trombley, B., Vahey, T., Bangerter, A., David-Schlegel, T., DesMarais, D., Frederickson, S., Geisser, M., Portnov, N., Silverman, G., Stahan, F., Vuong, S., Watt, G., Woodside, J., Zirbes, A., Breer, S., Haselhuhn, C., Longden, C., Mueller, C., Rice, M., Warren, D., Collins, S., Levi, S., Manual, J., Matous, L., Olsson, P., Peterson, S., Rogers, C., Steele, M. L., Beckmann, P., Jurjans, L., Terrian, S., Fraki, S., Fronheiser, M., Heinrichs, L., Kirby, D., Seivert, J., Steinberg, C., Watry, M., Boyle, K., Burnside, A., Kiffmeyer, R., Mosiman, W., Bailey, A., Byrnes, P., Stark, L., Weston, M., Whistler, D., Cordes, J., Engelhard, D., Becker, J., Bradley, P., Fisher, J., McLaughlin, H., Mendez, A. M., Miller, D., Ronan, R., Siga, B., Weissfeld, J. L., Salerno, M. B., Schragin, J., Warfel, T. E., Wolfe, P. W., Antico, D. A., Bee, M. T., Bittner, D. F., Corey, W. T., Hawkins, R. A., Herbick, W. T., Karwat, M. F., Leonard, K. J., Petrochko, C. N., Pickering, S. F., Smart, P. E., Walters, P. J., Zehner, J. A., Augustine, K., Misko, S., Richel, M., Riley, M. A., Warren, L., McDonough, K., Rozanok, B., Helms, J., Olson, P., Uttecht, S., Wirth, M., Atkins, R., Clement, L., Gurtner, D., Jones, L., Buys, S. S., Drosten, R., Murray, K., Nowers, K., Jenkins, P., Tripp, D., Herron, G., Van Stam, E., Varner, J., O'Toole, K., Olson, C., Omori, D., Andersen, A., Argyle, N., Avrin, J., Bacon, J., Broschinsky, M., Montalbo, C., Nolan, K., Randall, A., Schleip, K., Sheltra, S. J., Tischner, R., Toyn, C., Turner, K., Whittaker, B., Wicklander, E., Wolf, J., Baiton, C., Doi, B., Childs, J., Gren, L., Watson, D., Jones, T., Neilson, B., Ahumada, H., Bourija, H., Brown, C., Ferris, B., Hadfield, L., Hansen, K., Koford, J., Kopesec, S., Lloyd, A., Lofthouse, M., Matinkhah, S., May, V., Nichols, S., Nieves, A., Oviatt, M., Richardson, N., Rowley, A. L., Sandberg, E., Dave Scholl, S., Seguin, L., Shea, D., Smith, S., Street, P. A., Walters, M., Weiben, R., Wilcox, L., Zisumbo, R., Beck, T. M., Ball, S., Burt, T. B., Daniel, E. N., DeMordaunt, Q. A., Fisher, M. T., Fuchs, M. A., Hubler, B. E., Jennings, C. J., Lane, R. H., Leymaster, C. E., Macey, L. C., Marx, S. V., Maxwell, J. R., Nelson, B. B., Fairbanks, J., Wohlers, B., Heinz, J., Berreth, K., Marshall, R., Brekke, J., Jones, K., Barrow, A., Bashford, D., Clot, B., Cook, T., Dobson, L., Hamilton-Foss, A., Hanson, W., Hyder, J. E., Lewis-Burke, C., Mitchell, S., Osterhout, M., Patella, K., Peterson, P., Schornak-Curtis, S., Sirianni, L., Stoller, L., Vigeant, K., Whistle, C., Yates, J., Andriole, G., Claire Anderson, D., Bhalla, S., Bierhals, A. J., Bronfman, J., Glazer, H. S., Gutierrez, F. R., Geisse, G., Kotner, L. M., Javidan-Nejad, C., Rezai, K., Sagel, S. S., Semenkovich, J. W., Siegel, M. J., Sorrel, D., Woodard, P. K., Engelhart, D., Haverman, R., Campbell, A., Gardner, V., Gherardini, D., Hoese, L., Holdener, R., Ledbetter, L., Nieters, P., Reiners, C., Wade, J., Wiseman, M., Rueweler, P., Williams, R., Chi, D., Budd, T., Webb, J., Stolin, C., Garrett, K., Fleming, E., Freesmeier, E., Frye, J., Graham, D., Kaemmerer, H., Nevilles, J. A., Taylor, K., Blaine, J., Clark, K., Koppel, P., Maffitt, D., Moore, S., Molton, J., Phillips, S., Prior, F., Wolfsberger, M., Cosas, A., Kim, S., Kim, M., Liang, Y., Pilgram, T., Haas, A., Hartwell, D., Roeshe, D., Lowery, A., Meese, S., Naughton, K., Yoffie, R., Schwartzstein, R., Lin, P. J. P., Parritt, T. A., Grady, E. A., Damon, L., Gard, S., Griggs, R., Potemkin, A., Pollock, M. M., Clellan, S. M., Laron, M., Owens, T., Costello, P., Jacobson, F. L., Hunsaker, A. R., Spirn, P. W., Trotman-Bickenson, B., Christopoulos, V. E., Kazda, I. K., MacDougall, R. C., Walsh, A., Nawfel, R. D., Berger, R., Chan, P., Delano, M., Geiger, J., Krinopol, C., McGinnis, A. D., McLaughlin, A. M., Weatherby, R., Tung, G., Maineiro, M., Camara, L., Cobb, C., Foley, S., Morrell, E., Romano, D., Guillette, D., Smith, W., Aisner, J., Backer, M., Bramwitt, M., De Caravalho, V., Epstein, R., Joyce, P., Langenfeld, J. E., Reinert, A., Team, R., DeMarco, K., Lutzker, S., Musanti, R., Shiff, S., Wolfsohn, T., Hudak, C., Hugill, A., Furlong, M., Weslowsky, E., Carmen, S., Foster, D. L., Hansen, K., Pennetta, B., White, L. V., Tokarz, R., Trotta, M., Birofka, A., Kasales, C. J., Lewis, P. J., Weaver, J. B., Lenz, S. B., Barrett, A. C., Dauphinais, R., Heinz, J. R., Siemionko, M. K., Taplin, A. L., Wasson, L. S., DeAlmeida, L., Longacre, S., Meagher, K., Moser, C. M., Lawlor, J. K., O'Quinn, C., Krieger Black, N. E., Bradley, H. L., Bronson, J. K., Cosgrove, T., Haron, M. K., King, D., Mazuerk, P. M., O'Donnell, N. F., Pluta, D. J., Sackett, T. J., Turgeon, G. D., Albano, H., Bell, C., Bergen, J., Bizer, G., Carmichael, N. M., Cimis, C., Davis, S., DeAngelis, T., Fellows, G., Fenton, C., Ferola, J., Gankiewicz, N., Hastings, D., Howell, C., Johnson, M. E., Krisk, M., Lancor, H., Leary, C., LeBlanc, M., Leming, A., Leming, M., Mead, D., Milacek, M., Mood, J., Nordstrom, H., Palazzolo, C., Pierce, J., Remitz, R. P., Rider, J., Robbins, K. A., Sleasman, B., Spaulding, J., Vashel, C., Welch, A., Whitty, M., Williams, A. M., Karellas, A., Grayson, L., McCalister-Cross, C., Mesquita, S., Nguyen, A., Myers, L. N., Deaton, E., Maxfield, S., Thomas, K., Allen, P., Brooks, D., Chadwell, C., Couch, E., Devore, A., Flores, R., Francis, M., Landes, S., Mattingly, J., Oechsli, M., Pitino, B., Sams, S., Soukhanova, O., Bland, P., Bube, S., Hoffa, T., McElsain, B., Johnson, D., Francow, C., Johnson, S., Senn, P., Horton, K. M., Lawler, L. P., Bradford, L., Christensen, G., Bishop, J., Motley, L., Robertson, B., Stewart, R., Guzman, C., Blake, H. B., Bradford, H., Bradford, J., Burner, J., Kasecamp, J., Kaufmann, J. B., Kimball, D., Lewis, Z., Moesinger, S., Walsh, S., Yung, R., Zeng, M., Gambill, G., Merrill, S., Mahesh, M., Jolies, H. I., Kuzo, R. S., Morin, R. L., Abaya, R., Chewar, D., Shwarts, P., Allen, S., Manning, S., Awan, M. A. Z., Clinic, M., Jacksonville, Beagle, F. L., Cape, D., Zeiger, T., Amendolare, L., Bahr, N., Belyea, M., Berg, T., Burkhard, M., Cottrell, L., BeAngelis, K., Bvorak, M., Heather, L., Gay, B., Hatton, K., Jacoby, S., Kennedy, V., Krach, K., Laughren, M., Lavergne, C., Lawrence, M., Lynch, J., McDonald, A., Mestas, F., Moody, J., O'Brien, C., Pitts, J., Polding, B., Richardson, L., Robinson, K., Warren, A., Washburn, H., Wilson, E., Zagarra, L., Batton, K. M., Chellini, D., DeWitt, K., Fleming, D. R., Newton-Foster, C., MacDonald, R., Ott, J., Peterson, J., Sallas, M., Teepe, M., Thomas, R., Torrence, K., Hildestad, J., Hartman, T. E., Jett, J. R., McCollough, C. H., Midthun, B. E., Andrist, B. R., Hanson, N. E., Sathre, C. L., Schroeder, L. B., Sheeran, J. R., Walters, L. C., Andrist, C. L., Bungum, A. O., Bornhorst, C. L., Beno, B. M., Krpata, T. S., Lambrecht, A. M., McKey, C. M., Prudoehl, B. K., Richter, H. R., Brisendine, A., Adrales-Bentz, T., Arnold, K., Benjamin, B., Bodd, A., Keller, J., Saunders, T., Spicker, P., Shannon, S., Bailey, L., Comer, H., Espiritu, J., Helwi, S., Mack-Pipkin, B., Tockman, M., Evans, B., Wadhwa, N., Baptiste, N., Eysmans, C., Vera-Gonzalez, N., Hamm, L., Harjani, V., Sear, A., Blackwell, S., Fernandez, A., Williams, E., Coleman, K. A., Afiat, J., Kirchoff, L., Bowman, R., Brothers, C., Cohen, B., Fields, N., Guzman, R., Monje, C., Sterling, W., Thorpe, L., White, K., Williams, B., Nekervis, E., Franco, A., Glick, L., Grigolo, M., Harts, Y., Migo, A., Rockwell, K. P., Stein, A., Weyls, R., Berns, E., Biringer, M. T., Pino, A. D., Dubbs, P., Fehrmann, G. M., Goodwin, A. L., Granger, L., Haglage, J., Hirschy, J., Kristopher, J. W., Mac, N. M., Mahoney, G., Markarian, A., Ramirez, M., Taylor, M., West, K. M., Matthews, C. C., Jones, J., Cole, A., Dow, P., Fearon, J., Fodera, B., Ginther, B., McCall, R. 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B., Gallego, A., Hamm, G., Spivak, J., Pollard, M., Campa, O., Carter, B., Clark, S., Flores, M., Ho, J., Lee, T., Lewis, B., McMahon, J., Momongan, L., Ngo, J., Perryman, A., Rivas, N., Romo, C., Sookpisal, K., Stone, L., Voight, B., Williams, C., Adams, K., Do, P., Engber, K., Henry, L., Khalili, M., Morales, S., O'Carroll, C., Quijano, J., Borgheian, S., Inatomi, R., Lorenzo, A., Lorenzo, D., Nyborg, G., Salazar, V., Woo, M., Beck, P., Beerman, P., Jacobsen, J., Voight, K., Allman, E., Chen, S., Farkas, C., Forter, I., Marcus, P., Matthews, L., Silva-Gietzen, J., Sturgeon, E., Varner, G., Mullen, B., Stanford, W., Hoffman, E., Sprenger, K., Chapman, A., Crawford, K., Marietta, J., Kmetty, L., Meier, J., Pirotte, P., Rathmell, L., Hudson, M., Sieren, J., Cronin, P., Gross, B., Kelly, A., Patel, S., Pernicano, P., Holloway, L., Chalom, G., Henricks, E., Pool, J., Shepherd, D., Zapolski, D., Goodsitt, M., Hooks, H., Gefter, W., Lynn Werner, D., Smith, C. E., Choi, B. K., Lee, J. K., Holland, C., Matuza, J., Nosker, H. C., Russell, W., Cupp, S., O'Shea, M., Cates, M., Sanchez, E., Aganon-Acheta, M., Black, M., Blalock, D., Cromwell, H., Dunnington, J., Erasmus, J., Gladish, G., Gupta, S., Haynes, M. W., Hensley, T., Iyer, R. B., Madewell, J., Malbari, T., Marom, E. M., Morice, R., Rao, S., Sabloff, B., Scully, N. F., Tekchandani, S., Truong, M., Wicks, D., Geiser, W. R., Montague, J. L., Patel, M., Robinson, T., Donnelly, E. F., Thielke, E., Bell, A. M., Pickens, D. R., Bowman, W. A., Herron, T., Shone, D., Chin, B., Chen, M., Harmon, L., Hinshaw, L., Nelson, C., Biracree, D., Boyles, D., Burrough, A., Davis, A., Drake, E., Frost, E., Long, A., Bowman, E. & Dyer, S., Jan 1 2011, In: Radiology. 258, 1, p. 243-253 11 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    1021 Scopus citations

  • The role of the cerebellum in sub- and supraliminal error correction during sensorimotor synchronization: Evidence from fMRI and TMS

    Bijsterbosch, J. D., Lee, K. H., Hunter, M. D., Tsoi, D. T., Lankappa, S., Wilkinson, I. D., Barker, A. T. & Woodruff, P. W. R., May 1 2011, In: Journal of Cognitive Neuroscience. 23, 5, p. 1100-1112 13 p.

    Research output: Contribution to journal › Article › peer-review

    67 Scopus citations

  • Volumetric Quantitative Computed Tomography Measurement Precision for Volumes and Densities of Tarsal and Metatarsal Bones

    Commean, P. K., Kennedy, J. A., Bahow, K. A., Hildebolt, C. F., Liu, L., Smith, K. E., Hastings, M. K., Ju, T., Prior, F. W. & Sinacore, D. R., Jul 2011, In: Journal of Clinical Densitometry. 14, 3, p. 313-320 8 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    19 Scopus citations

  • Web servers and services for electrostatics calculations with APBS and PDB2PQR

    Unni, S., Huang, Y., Hanson, R. M., Tobias, M., Krishnan, S., Li, W. W., Nielsen, J. E. & Baker, N. A., May 2011, In: Journal of Computational Chemistry. 32, 7, p. 1488-1491 4 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    234 Scopus citations
  • 2010

    A kernel-based graphical model for diffusion tensor registration

    Sotiras, A., Neji, R., Deux, J. F., Komodakis, N., Fleury, G. & Paragios, N., 2010, 2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings. IEEE Computer Society, p. 524-527 4 p. 5490295. (2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    4 Scopus citations

  • Alzheimer disease identification using amyloid imaging and reserve variables: Proof of concept

    Roe, C. M., Mintun, M. A., Ghoshal, N., Williams, M. M., Grant, E. A., Marcus, D. S. & Morris, J. C., Jul 6 2010, In: Neurology. 75, 1, p. 42-48 7 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    46 Scopus citations

  • Bioluminescence enhancement through fusion of optical imaging and cinematic video flow

    Savinaud, M., Sotiras, A., Maitrejean, S. & Paragios, N., 2010, 2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings. p. 688-691 4 p. 5490081. (2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Kalman-filter-based block matching for arterial wall motion estimation from B-mode ultrasound

    Gastounioti, A., Golemati, S., Stoitsis, J. & Nikita, K. S., 2010, 2010 IEEE International Conference on Imaging Systems and Techniques, IST 2010 - Proceedings. p. 234-239 6 p. 5548454. (2010 IEEE International Conference on Imaging Systems and Techniques, IST 2010 - Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    20 Scopus citations

  • Open access series of imaging studies: Longitudinal MRI data in nondemented and demented older adults

    Marcus, D. S., Fotenos, A. F., Csernansky, J. G., Morris, J. C. & Buckner, R. L., Dec 2010, In: Journal of Cognitive Neuroscience. 22, 12, p. 2677-2684 8 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    440 Scopus citations

  • Regulatory compliance requirements for an open source electronic image trial management system

    Rhodes, C., Moore, S., Clark, K., Maffitt, D., Perry, J., Handzel, T. & Prior, F., 2010, 2010 Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC'10. p. 3475-3478 4 p. 5627838. (2010 Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC'10).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    4 Scopus citations

  • Simultaneous geometric - Iconic registration

    Sotiras, A., Ou, Y., Glocker, B., Davatzikos, C. & Paragios, N., 2010, Medical Image Computing and Computer-Assisted Intervention, MICCAI2010 - 13th International Conference, Proceedings. PART 2 ed. Springer Verlag, p. 676-683 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6362 LNCS, no. PART 2).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    27 Scopus citations

  • Sources of non-physiologic noise in simultaneous EEG-fMRI data: A phantom study

    Politte, D., Prior, F., Ponton, C., Nolan, T. & Larson-Prior, L., 2010, 2010 Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC'10. p. 5129-5132 4 p. 5626168. (2010 Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC'10).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    6 Scopus citations
  • 2009

    Atlas-based deformable mutual population segmentation

    Sotiras, A., Komodakis, N., Langs, G. & Paragios, N., 2009, Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009. IEEE Computer Society, p. 5-8 4 p. 5192969. (Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    6 Scopus citations

  • Blast-related brain injury: imaging for clinical and research applications: report of the 2008 st. louis workshop

    Benzinger, T. L. S., Brody, D., Cardin, S., Curley, K. C., Mintun, M. A., Mun, S. K., Wong, K. H., Wrathall, J. R., Armstrong, R. C., Bayly, P. V., Bentley, T. B., Chavko, M., Corbetta, M., Culver, J. P., DeWitt, D. S., Faden, A. I., Fiskum, G., Fitzpatrick, S. M., Gennarelli, T. & Ghajar, J. & 36 others, Gullapalli, R. P., Hovda, D., Jost, R. G., Kharasch, E. D., Kharasch, K., Kochanek, P., Lammle, M., Leggieri, M. J., Latour, L. L., Little, D. M., Mac Donald, C. L., Macedonia, C., Marcus, D., McCabe, J. T., McCarron, R. M., Moore, D., Mukherjee, P., Povlishock, J., Pancrazio, J., Petersen, S., Peskind, E. R., Pierce, K. J., Pineda, J. A., Raskind, M., Riedel, C., Ritzel, D., Shimony, J. S., Smith, A. B., Smith, D. H., Smirniotopoulos, J., Song, V. S. K., Sterkel, B. B., Svetlov, S., VandeVord, P. J., Young, A. W. & Zipfel, G., Dec 1 2009, In: Journal of neurotrauma. 26, 12, p. 2127-2144 18 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    66 Scopus citations

  • Cerebrospinal fluid tau and ptau181 increase with cortical amyloid deposition in cognitively normal individuals: Implications for future clinical trials of Alzheimer's disease

    Fagan, A. M., Mintun, M. A., Shah, A. R., Aldea, P., Roe, C. M., Mach, R. H., Marcus, D., Morris, J. C. & Holtzman, D. M., Nov 2009, In: EMBO Molecular Medicine. 1, 8-9, p. 371-380 10 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    299 Scopus citations

  • Collecting 48,000 CT exams for the lung screening study of the national lung screening trial

    Clark, K. W., Gierada, D. S., Marquez, G., Moore, S. M., Maffitt, D. R., Moulton, J. D., Wolfsberger, M. A., Koppel, P., Phillips, S. R. & Prior, F. W., Dec 2009, In: Journal of Digital Imaging. 22, 6, p. 667-680 14 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    19 Scopus citations

  • Decreased cerebrospinal fluid Aβ 42 correlates with brain atrophy in cognitively normal elderly

    Fagan, A. M., Head, D., Shah, A. R., Marcus, D., Mintun, M., Morris, J. C. & Holtzman, D. M., Feb 2009, In: Annals of neurology. 65, 2, p. 176-183 8 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    298 Scopus citations

  • Derived data storage and exchange workflow for large-scale neuroimaging analyses on the BIRN grid

    Keator, D. B., Wei, D., Gadde, S., Bockholt, J., Grethe, J. S., Marcus, D., Aucoin, N. & Ozyurt, I. B., Sep 7 2009, In: Frontiers in Neuroinformatics. 3, SEP, 30.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    30 Scopus citations

  • Graphical models and deformable diffeomorphic population registration using global and local metrics

    Sotiras, A., Komodakis, N., Glocker, B., Deux, J. F. & Paragios, N., 2009, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2009 - 12th International Conference, Proceedings. PART 1 ed. Springer Verlag, p. 672-679 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5761 LNCS, no. PART 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    19 Scopus citations

  • Improved Surgical Outcomes for Breast Cancer Patients Receiving Neoadjuvant Aromatase Inhibitor Therapy: Results from a Multicenter Phase II Trial

    Olson, J. A., Budd, G. T., Carey, L. A., Harris, L. A., Esserman, L. J., Fleming, G. F., Marcom, P. K., Leight, G. S., Giuntoli, T., Commean, P., Bae, K., Luo, J. & Ellis, M. J., May 2009, In: Journal of the American College of Surgeons. 208, 5, p. 906-914 9 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    74 Scopus citations

  • Reliability and validity of measures of hammer toe deformity angle and tibial torsion

    Kwon, O. Y., Tuttle, L. J., Commean, P. K. & Mueller, M. J., Sep 2009, In: Foot. 19, 3, p. 149-155 7 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    11 Scopus citations

  • SU‐DD‐A4‐06: Tradeoff Between Noise and Resolution in CT Images — Comparison of Filtered Backprojection and the Penalized Alternating Minimization Algorithm

    Evans, J., Politte, D., Whiting, B., O'sullivan, J. & Williamson, J., Jun 2009, In: Medical physics. 36, 6, p. 2427 1 p.

    Research output: Contribution to journal › Article › peer-review

  • Tarsal and metatarsal bone mineral density measurement using volumetric quantitative computed tomography

    Commean, P. K., Ju, T., Liu, L., Sinacore, D. R., Hastings, M. K. & Mueller, M. J., Oct 2009, In: Journal of Digital Imaging. 22, 5, p. 492-502 11 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    34 Scopus citations

  • TU‐D‐304A‐07: Reconstruction From Experimentally Acquired Transmission CT Sinograms with the Polyenergetic Alternating Minimization Algorithm Using An Equivalent X‐Ray Spectrum Estimated From Transmission Measurements

    Evans, J., O'sullivan, J., Politte, D., Lasio, G. & Williamson, J., Jun 2009, In: Medical physics. 36, 6, p. 2738 1 p.

    Research output: Contribution to journal › Article › peer-review

  • Veritas: Combining expert opinions without labeled data

    Cholleti, S. R., Goldman, S. A., Blum, A., Politte, D. G., Don, S., Smith, K. & Prior, F., Oct 2009, In: International Journal on Artificial Intelligence Tools. 18, 5, p. 633-651 19 p.

    Research output: Contribution to journal › Article › peer-review

    9 Scopus citations
  • 2008

    A national human neuroimaging collaboratory enabled by the biomedical informatics research network (BIRN)

    Keator, D. B., Grethe, J. S., Marcus, D., Ozyurt, B., Gadde, S., Murphy, S., Pieper, S., Greve, P. D., Notestine, R., Bockholt, H. J. & Papadopoulos, P., Mar 2008, In: IEEE Transactions on Information Technology in Biomedicine. 12, 2, p. 162-172 11 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    110 Scopus citations

  • Bone mineral density of the tarsals and metatarsals with reloading

    Hastings, M. K., Gelber, J., Commean, P. K., Prior, F. & Sinacore, D. R., Jun 2008, In: Physical therapy. 88, 6, p. 766-779 14 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    9 Scopus citations

  • Interactive separation of segmented bones in CT volumes using graph cut

    Liu, L., Raber, D., Nopachai, D., Commean, P., Sinacore, D., Prior, F., Pless, R. & Ju, T., 2008, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2008 - 11th International Conference, Proceedings. PART 1 ed. p. 296-304 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5241 LNCS, no. PART 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    47 Scopus citations